catalase activity

traitmech:000075 · CLASS · REVIEWED

A physiological enzyme-activity phenotype in which a cell produces catalase, which decomposes hydrogen peroxide into water and oxygen; it is the basis of the diagnostic catalase test.

Catalase hydrogen-peroxide detoxification

Evidence-backed causal sketch linking catalase to dismutation of hydrogen peroxide into water and molecular oxygen.

Catalase hydrogen-peroxide detoxification Interactive directed graph showing evidence-backed causal relationships for catalase activity.

Edge evidence

  • catalase enables catalase activity RO:0002327

    Catalase carries out the catalase molecular function.

    • DOI:10.1007/s00018-003-3206-5 Chelikani et al. characterize catalases as the enzymes performing this dismutation.
  • catalase activity consumes hydrogen peroxide biolink:consumes

    The catalase reaction consumes hydrogen peroxide.

    • DOI:10.1038/nrmicro3032 Imlay supports catalase as a primary hydrogen-peroxide scavenging defense.
  • catalase activity produces molecular oxygen METPO:2000202

    The catalase reaction produces molecular oxygen.

    • DOI:10.1007/s00018-003-3206-5 Catalase dismutation yields O2 (2 H2O2 to O2 + 2 H2O).
  • catalase activity produces water METPO:2000202

    The catalase reaction produces water.

    • DOI:10.1007/s00018-003-3206-5 Catalase dismutation yields water.
  • catalase enables catalase activity RO:0002327

    Production of catalase confers the catalase-activity phenotype.

    • DOI:10.1007/s00018-003-3206-5 Supports catalase possession as the basis of the catalase-activity phenotype.
  • catalase activity decomposes hydrogen peroxide

    Catalase activity rapidly decomposes hydrogen peroxide into water and molecular oxygen.

    • DOI:10.3390/biom14060697 Catalase rapidly decomposes hydrogen peroxide into water and molecular oxygen (canonical enzymology).
  • hydrogen peroxide activates OxyR RO:0002213

    Hydrogen peroxide activates the OxyR peroxide-sensing regulator.

    • DOI:10.1038/nrmicro3032 An intracellular H2O2 concentration of ~200 nM is sufficient to drive OxyR into a disulfide-bonded (active) form.
  • hydrogen peroxide favors scavenging by catalase activity

    High hydrogen peroxide concentrations favor scavenging by catalases, which turn over much faster than alkyl hydroperoxide reductase.

    • DOI:10.1038/nrmicro3032 Organisms rely on catalases when H2O2 levels are high; catalases turn over much more quickly than Ahp. Likely general across aerobes/facultative anaerobes.
  • OxyR regulates peroxide defense systems RO:0002211

    OxyR regulates peroxide defense systems; most bacteria sense H2O2 via OxyR or PerR.

    • DOI:10.3389/fimmu.2021.667343 Most bacteria sense H2O2 via OxyR or PerR transcription factors that control peroxide defense systems.
  • PerR regulates peroxide defense systems RO:0002211

    PerR regulates peroxide defense systems; most bacteria sense H2O2 via OxyR or PerR.

    • DOI:10.3389/fimmu.2021.667343 Most bacteria sense H2O2 via OxyR or PerR transcription factors that control peroxide defense systems.
  • heme biosynthesis required for catalase

    Heme biosynthesis is required for catalase activation; impaired heme synthesis delays peroxide degradation.

    • DOI:10.1111/mmi.12967 Ferrochelatase (hemH) function is required for timely induction of catalase (KatG) activity; loss delays H2O2 degradation and growth.

Provenance

Source
METPO (2025-11-25)
Definition source
DOI:10.1007/s00018-003-3206-5

Parent traits (1)

Synonyms (1)

  • catalase-positive RELATED_SYNONYM · DOI:10.1007/s00018-003-3206-5

kg-microbe context

Matched 1 kg-microbe node via parent_proxy.

  • METPO:1000059 [-2.682, -2.070, -3.656, -0.652, …]

512-dim DeepWalkSkipGramEnsmallen embedding from kg-microbe (2026-04-25).

Nearest neighbors in embedding space

Top-8 cosine-similar METPO traits from the 2026-04-25 deepwalk (512-D).

Curation history

  1. · PROPOSED_FROM_RESEARCH · claude

    Proposed candidate PHYSIOLOGY trait (catalase activity) from literature research to fill the enzyme-activity-phenotype gap.

  2. · CURATED_CAUSAL_GRAPH · claude

    Added evidence-backed causal graph (catalase hydrogen-peroxide dismutation) with CHEBI/GO node groundings and RO/METPO/biolink predicate groundings; promoted PROPOSED to REVIEWED.

  3. · GROUND_CAUSAL_NODES · claude

    Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (UniProtKB:A0A071MK53×1).

  4. · ENRICH_CAUSAL_GRAPH · claude

    Added 6 evidence-backed generic edges (4 new nodes) from the deep-research report.

  5. · GROUND_CAUSAL_PREDICATES · claude

    Grounded 3 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002211×2, RO:0002213×1).

  6. · GROUND_CAUSAL_NODES · claude

    Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (GO:0006783×1).

  7. · GROUND_CAUSAL_NODES · claude

    Grounded 2 causal-node grounding field(s) via mappings/node_grounding.tsv (UniProtKB:A0A9P2M4N5×1, UniProtKB:A0A097ASJ8×1).