photoheterotrophic
METPO:1000657 · CLASS · REVIEWED
A trophic type in which an organism uses light as the energy source and organic compounds as the primary carbon source for biosynthesis.
Photoheterotrophic light-supported organic carbon assimilation
Edge evidence
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photoheterotrophic
uses energy source
light
METPO:2000010Photoheterotrophic growth uses light as the energy input.
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DOI:10.1016/B978-012373944-5.00083-3light and reduced organic compounds
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bacteriochlorophyll
part of
photosynthetic reaction center
biolink:part_ofBacteriochlorophyll pigments occur in reaction centers of many anoxygenic phototrophs.
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DOI:10.1128/AEM.01747-12reaction centers composed of bacteriochlorophyll
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light
captured by
photosynthetic reaction center
Reaction centers capture light to initiate photochemical energy conversion.
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DOI:10.1016/B978-0-12-809633-8.20672-9utilize light as an energy source
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photosynthetic reaction center
initiates
photosynthetic electron transport
Photochemical charge separation drives photosynthetic electron transport.
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DOI:10.1016/B978-0-12-809633-8.20672-9light-induced redox chemistry
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photosynthetic electron transport
produces
ATP
METPO:2000202Photosynthetic electron transport conserves light energy as ATP.
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DOI:10.1016/B978-0-12-809633-8.20672-9can be used to produce ATP
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photoheterotrophic
uses carbon source
organic carbon
METPO:2000006Photoheterotrophs require organic compounds as the carbon source.
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DOI:10.1016/B978-012373944-5.00083-3reduced organic compounds
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organic carbon
assimilated into
biomass
Light-supported photoheterotrophs assimilate supplied organic carbon into biomass.
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DOI:10.1128/AEM.01747-12accumulate the supplied organic carbon
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light
activates
proteorhodopsin proton pumping
RO:0002213Light drives proton pumping by proteorhodopsin in rhodopsin-based photoheterotrophs.
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DOI:10.1007/s12275-024-00125-0
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proteorhodopsin proton pumping
generates
membrane potential
biolink:producesProteorhodopsin proton transport establishes a membrane potential.
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DOI:10.1007/s12275-024-00125-0
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membrane potential
enables
ATP production
RO:0002327The membrane potential drives ATP production.
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DOI:10.1007/s12275-024-00125-0
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proteorhodopsin
cannot generate
NAD(P)H for anabolic metabolism
Boundary edge: proteorhodopsin phototrophy yields ATP but no reducing power for biosynthesis.
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DOI:10.4014/jmb.2410.10034
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aerobic anoxygenic phototrophs
perform
photophosphorylation
Aerobic anoxygenic phototrophs generate ATP via photophosphorylation.
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DOI:10.1186/s40793-024-00573-6
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photophosphorylation
produces
ATP
METPO:2000202Photophosphorylation conserves light energy as ATP.
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DOI:10.1186/s40793-024-00573-6
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aerobic anoxygenic phototrophs
relies primarily on
dissolved organic matter
Aerobic anoxygenic phototrophs primarily rely on dissolved organic matter as their energy/carbon source.
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DOI:10.1186/s40793-024-00573-6
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Provenance
- Source
- METPO (2025-11-25)
- Author
- Luke Wang
- Definition source
- DOI:10.1016/B978-012373944-5.00083-3
Parent traits (1)
Synonyms (2)
- photoheterotroph
- photoheterotrophy
kg-microbe context
Matched 1 kg-microbe node via direct_metpo.
METPO:1000657[-0.306, -3.156, -1.761, +2.105, …]
Nearest neighbors in embedding space
- physiology phototrophic 0.849
- physiology photoautotrophic 0.637
- physiology trophic type 0.449
- physiology photolithotrophic 0.441
- physiology hydrogenotrophic 0.436
- physiology carboxydotrophic 0.436
- physiology photoorganoheterotrophic 0.430
- physiology photolithoautotrophic 0.425
Curation history
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SEEDED_FROM_METPO · seed_from_metpo
imported from data/raw/metpo.owl (CLASS)
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ADDED_CAUSAL_GRAPH · codex
Added DOI-backed causal graph for light capture, bacteriochlorophyll reaction centers, ATP generation, and organic carbon assimilation.
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GROUND_CAUSAL_PREDICATES · claude
Grounded 3 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (METPO:2000010×1, METPO:2000202×1, METPO:2000006×1).
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GROUND_CAUSAL_PREDICATES · claude
Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (biolink:part_of×1).
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GROUND_CAUSAL_NODES · claude
Grounded 3 causal-node grounding field(s) via mappings/node_grounding.tsv (PATO:0001717×1, GO:0009767×1, CHEBI:50860×1).
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GROUND_CAUSAL_NODES · claude
Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (METPO:1007501×1).
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RETYPE_CAUSAL_NODES · claude
Re-typed 1 causal-node node_type field(s) to align with CausalNodeTypeEnum semantics: biomass: BIOLOGICAL_PROCESS → CHEMICAL ×1.
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GROUND_CAUSAL_NODES · claude
Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (CHEBI:38201×1).
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ENRICH_CAUSAL_GRAPH · claude
Added 7 evidence-backed generic edges (8 new nodes) from the deep-research report.
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GROUND_CAUSAL_PREDICATES · claude
Grounded 4 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002213×1, biolink:produces×1, RO:0002327×1, METPO:2000202×1).
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GROUND_CAUSAL_NODES · claude
Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (UniProtKB:A0A1D7QWW9×1).