photolithoautotrophic
METPO:1000665 · CLASS · REVIEWED
A trophic type in which an organism obtains energy from light and carbon from carbon dioxide using inorganic electron donors.
Photolithoautotrophic light and inorganic-donor mechanism
Edge evidence
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photolithoautotrophic
uses energy source
light
METPO:2000010Photolithoautotrophy depends on light as the energy source.
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DOI:10.3389/fmicb.2011.00165use light as the energy source
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light
regulates
photosynthetic electron transport
RO:0002211Light drives photosynthetic electron transport.
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DOI:10.3389/fmicb.2011.00165light-induced electron transport
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inorganic electron donor
provides electrons to
photosynthetic electron transport
METPO:2007403Inorganic electron donors supply electrons for photolithotrophic metabolism.
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DOI:10.3390/antiox10060829reduced sulfur compounds as an electron donor
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sulfide
participates in
sulfur oxidation
biolink:participates_inSulfide is an example reduced inorganic donor oxidized by phototrophic bacteria.
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DOI:10.3390/antiox10060829oxidizes reduced sulfur compounds
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photosynthetic electron transport
produces
reducing power
METPO:2000202Light-induced electron transport produces reductants.
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DOI:10.3389/fmicb.2011.00165NAD(P)H and reduced ferredoxin
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carbon dioxide
fixed by
autotrophic CO2 fixation
METPO:2007404CO2 is fixed during autotrophic carbon assimilation.
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DOI:10.1128/AEM.02473-10autotrophic CO2 fixation
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reducing power
enables
autotrophic CO2 fixation
RO:0002327Reductants generated by light-driven electron transport support CO2 fixation.
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DOI:10.3389/fmicb.2011.00165reducing equivalent flow during photoautotrophic
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autotrophic CO2 fixation
produces
biomass
METPO:2000202Autotrophic CO2 fixation produces cellular carbon.
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DOI:10.1128/AEM.02473-10cellular carbon
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photosynthetic electron transport
generates
NADPH
biolink:producesPhotosynthetic electron transport generates NADPH as terminal reductant.
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DOI:10.1038/s44222-023-00093-x
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carbonic anhydrase
interconverts
bicarbonate
Carbonic anhydrase interconverts CO2 and bicarbonate, accelerating DIC equilibration.
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DOI:10.1128/aem.01557-23
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inorganic carbon transporter
imports
bicarbonate
METPO:2000208Inorganic carbon transporters import dissolved inorganic carbon species.
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DOI:10.1128/aem.01557-23
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RuBisCO
catalyzes
autotrophic CO2 fixation
biolink:catalyzesRuBisCO catalyzes the carboxylation step of autotrophic CO2 fixation.
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DOI:10.1128/aem.01557-23
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reducing power
has part
NADPH
NADPH is a concrete reductant constituting the reducing power for biosynthesis.
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DOI:10.1038/s44222-023-00093-x
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Provenance
- Source
- METPO (2025-11-25)
- Definition source
- DOI:10.3389/fmicb.2011.00165
Parent traits (1)
Synonyms (1)
- photolithoautotroph
kg-microbe context
Matched 1 kg-microbe node via direct_metpo.
METPO:1000665[-2.042, -2.782, -5.220, +0.946, …]
Nearest neighbors in embedding space
- physiology carboxydotrophic 0.958
- physiology hydrogenotrophic 0.958
- physiology trophic type 0.955
- physiology photoorganoheterotrophic 0.905
- physiology lithoautotrophic 0.894
- physiology photolithotrophic 0.877
- physiology chemoautotrophic 0.873
- physiology mixotrophic 0.869
Curation history
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SEEDED_FROM_METPO · seed_from_metpo
imported from data/raw/metpo.owl (CLASS)
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ADDED_CAUSAL_GRAPH · codex
Added DOI-backed causal graph for light-driven electron transport, inorganic electron donors, sulfide oxidation, and autotrophic CO2 fixation.
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GROUND_CAUSAL_PREDICATES · claude
Grounded 3 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (METPO:2000202×2, METPO:2000010×1).
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GROUND_CAUSAL_PREDICATES · claude
Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (biolink:participates_in×1).
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GROUND_CAUSAL_PREDICATES · claude
Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (METPO:2007404×1).
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RENAME_PREDICATE_LABELS · claude
Renamed 2 causal-edge predicate label(s) to align with existing groundings: drives → regulates ×1; supports → enables ×1.
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GROUND_CAUSAL_PREDICATES · claude
Grounded 2 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002211×1, RO:0002327×1).
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GROUND_CAUSAL_NODES · claude
Grounded 3 causal-node grounding field(s) via mappings/node_grounding.tsv (PATO:0001717×1, GO:0009767×1, CHEBI:15138×1).
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GROUND_CAUSAL_NODES · claude
Grounded 3 causal-node grounding field(s) via mappings/node_grounding.tsv (METPO:1007502×1, METPO:1007503×1, METPO:1007501×1).
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RETYPE_CAUSAL_NODES · claude
Re-typed 1 causal-node node_type field(s) to align with CausalNodeTypeEnum semantics: biomass: BIOLOGICAL_PROCESS → CHEMICAL ×1.
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GROUND_CAUSAL_NODES · claude
Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (GO:0015977×1).
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RETYPE_CAUSAL_NODES · claude
Re-typed 1 causal-node node_type field(s) to align with CausalNodeTypeEnum semantics: reducing power: CHEMICAL → CAPACITY ×1.
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GROUND_CAUSAL_NODES · claude
Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (GO:0019417×1).
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GROUND_CAUSAL_PREDICATES · claude
Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (METPO:2007403×1).
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ENRICH_CAUSAL_GRAPH · claude
Added 5 evidence-backed generic edges (5 new nodes) from the deep-research report.
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GROUND_CAUSAL_PREDICATES · claude
Grounded 3 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (biolink:produces×1, METPO:2000208×1, biolink:catalyzes×1).
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GROUND_CAUSAL_NODES · claude
Grounded 2 causal-node grounding field(s) via mappings/node_grounding.tsv (CHEBI:16474×1, UniProtKB:A0A075WF79×1).
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GROUND_CAUSAL_NODES · claude
Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (CHEBI:17544×1).
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GROUND_CAUSAL_NODES · claude
Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (UniProtKB:A0A009PMS8×1).